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Bio-Toolkit

DNA to Protein

6-frame DNA to protein translation

Min ORF:aa

Tool Guide

Definition

DNA → Protein 6-frame translator — Translates a DNA sequence into protein using all six reading frames (three 5'→3' + three reverse complement) with the standard genetic code. Stop codons shown as * or X.

Purpose

(1) Find ORFs (Open Reading Frames) — locate the longest ORF across 6 frames (2) Verify in-frame insertion (e.g., check frameshift after pET vector cloning) (3) Convert Sanger sequencing reads to protein sequence (4) Predict protein candidates from unknown sequence

How to Use

① Enter DNA sequence (case-insensitive, spaces/newlines/digits auto-removed) ② Auto-displays: • Frame +1, +2, +3 (forward strand) • Frame −1, −2, −3 (reverse complement strand) • ORF length per frame, longest ORF highlighted ③ Uses standard codon table (Met=M, Trp=W, Stop=*) Results shown in 1-letter code. Mitochondrial/alternative codes not supported.

Examples

Example) GFP partial sequence 5'-ATGGTGAGCAAGGGCGAGGAG-3' (21 bp) → Frame +1: M-V-S-K-G-E-E (proper start) → Frame +2: W-*-A-R-A-R → Frame +3: G-E-Q-G-R-G → Frames −1, −2, −3: many stops, no ORF → Conclusion: Frame +1 is valid ORF (starts with M)

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🔗 Bio Resources

🔬NCBI PubMed🧪AlphaFold DB🏥ClinicalTrials.gov📄bioRxiv🚀ASGCT🏛️Broad Institute

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